放射大數據體學資料庫分析與應用
Big Data Analysis and Application for Omics and Radiation
| 節 | 週二 |
|---|---|
5 13:20–14:10 | 放射大數據體學資料庫分析與應用 YB134 2 節連堂 |
6 14:20–15:10 |
* 根據陽明交大上課時間表所列
大數據已經是時勢所趨且在部分研究中蘊含豐富資源供研究及使用, 本課程將簡介原理及基礎分析/運算大數據相關技術. Big data/Omics has become the general trend, and there are abundant research and utilization resources in some studies. This course will introduce the principles and basic analysis/operation of big data related technologies.
通過講解,讓學生學習大數據/資料庫的基礎知識,為後續的實驗設計提供數據並建立基礎,適合碩士學生應用於自身實驗,精益求精;並期待可激發學生對相關領域的興趣,希望能吸引更多學生未來進入相關領域一同探索新知。 Through the explanation, let students learn the basic knowledge of big data/database, provide data, and lay the foundation for subsequent experimental design, suitable for master students to apply to their own experiments, and strive for excellence; and hope to stimulate students' interest in related fields, hope to be able to Attract more students to enter related fields to explore new knowledge together in the future.
出席20%, 期末口頭報告50%, 期末書面報告30%. Attendance 20%, Final oral presentation 50%, Final paper work 30%
| 週次 | 主題 |
|---|---|
| 第 1 週 | Introduction |
| 第 2 週 | Biochips & microarray and NGS |
| 第 3 週 | GeneSpring & data normalization |
| 第 4 週 | Ingenuity Pathway Analysis |
| 第 5 週 | RNA-seq |
| 第 6 週 | Survival curves-1 |
| 第 7 週 | Survival curves-2 |
| 第 8 週 | Mid-term Exam |
| 第 9 週 | Various bioinformatics tools |
| 第 10 週 | Cancer cell line encyclopedia (CCLE) |
| 第 11 週 | Drug resistance |
| 第 12 週 | Example sharing |
| 第 13 週 | Expert Lectures and Sharing |
| 第 14 週 | Final Oral presentation-1 |
| 第 15 週 | Final Oral presentation-2 |
| 第 16 週 | Final Oral presentation-3 |
| 第 17 週 | Online course |
| 第 18 週 | Online course |
1. Big Data in Omics and Imaging: Association Analysis (Chapman & Hall/CRC Computational Biology Series) 2. Integrating Omics Data, Cambridge University Press, 2015